Astrocyte cell migration

pathway activity — cross-omics
GO:0043615Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Astrocyte cell migration pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PPP1R16A, ZNF623, and TOP1MT, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAPPP1R16A →+0.631+0.551.002.00334
BRCAZNF623 →+0.462+0.608.004.00234
BRCATOP1MT →+0.649+0.807<.001<.00134
COADTBC1D30 →-0.210-0.703.005.00533
COADLILRB2 →-0.458-0.555.003.00733
BRCASHARPIN →+0.543+0.614.004.00124
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration