Amide catabolic process

pathway activity — cross-omics
GO:0043605Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Amide catabolic process pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PRODH, PPL, and LAPTM4B, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADPRODH →+1.196+0.180.002.00535
LSCCPPL →+1.151+0.211<.001<.00134
BRCALAPTM4B →-0.638-0.104.001<.00134
UCECGGT3P →+0.200+0.112.003.00234
HNSCGDA →+1.683+0.193<.001<.00134
LSCCTMPRSS11F →+1.558+0.246<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration