Regulation of carbohydrate catabolic process

pathway activity — cross-omics
GO:0043470Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Regulation of carbohydrate catabolic process pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_NSCLC_LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are UCHL1, CBSL, and ZNF311, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of carbohydrate catabolic process activity versus UCHL1 in LUNG_NSCLC_LUAD (Pearson r = 0.46).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADUCHL1 →+3.633+0.548<.001<.00135
BLOOD_LeukemiaCBSL →+1.332+0.357.005.00934
SKINZNF311 →+0.932+0.920.006.00333
KIDNEYSERPINA3 →+0.996+0.196<.001<.00133
SOFT_TISSUESLC25A14 →-0.690-0.158.002.00924
KIDNEYCSPG5 →+1.508+0.215<.001.00833
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0043470 vs UCHL1 — LUNG_NSCLC_LUAD

Per-sample scatter of Regulation of carbohydrate catabolic process activity vs UCHL1 in LUNG_NSCLC_LUAD.

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Exploration