Negative regulation of DNA-binding transcription factor activity

pathway activity — cross-omics
GO:0043433Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of DNA-binding transcription factor activity pathway is significantly associated with the protein abundance of multiple proteins, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are ANKRD44, RPL5, and SNX6, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCANKRD44 →+0.432+0.041<.001<.00139
COADRPL5 →-0.180-0.022<.001<.00138
BRCASNX6 →+0.186+0.017<.001.00138
BRCAWIPF1 →+0.475+0.038<.001<.00138
BRCAYME1L1 →-0.424-0.040<.001<.00138
BRCACNRIP1 →+0.517+0.031<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration