Regulation of cysteine-type endopeptidase activity involved in apoptotic process

pathway activity — cross-omics
GO:0043281Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of cysteine-type endopeptidase activity involved in apoptotic process pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CMTM4, DOCK1, and ZNF337, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCMTM4 →-0.635-0.158.003<.00134
LUADDOCK1 →-0.708-0.140.003.00334
BRCAZNF337 →-0.411-0.132.002.00134
BRCAIFNGR1 →+0.538+0.119.001.00434
OVKMT5C →-0.612-0.132.008.00433
OVGABBR1 →-0.999-0.149.003.00233
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration