Erythrocyte maturation

pathway activity — cross-omics
GO:0043249Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Erythrocyte maturation pathway is significantly associated with the RNA expression of multiple genes, with the CNS cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CENPV, METTL7A, and PPARD, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, CENPV grouped by Erythrocyte maturation-low versus -high activity in CNS.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSCENPV →+1.412+0.781.004<.00134
OESOPHAGUSMETTL7A →-2.448-0.954.007.00934
PANCREASPPARD →-1.065-1.133.004.00234
BONEMAST1 →+2.722+0.373.002<.00134
BONEFCHO1 →+1.402+0.312.001.00134
OVARYCEBPD →-1.540-1.252.003.00634
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

CENPV by Erythrocyte maturation activity — CNS

Box plot of CENPV in Erythrocyte maturation-low vs -high samples in CNS.

Explore this box plot interactively →

Exploration