Negative regulation of cysteine-type endopeptidase activity involved in apoptotic process

pathway activity — cross-omics
GO:0043154Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of cysteine-type endopeptidase activity involved in apoptotic process pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are THAP9, SCML2P2, and E2F5, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTHAP9 →-0.353-0.202.001<.00135
GBMSCML2P2 →-0.494-0.197.003<.00135
HNSCE2F5 →-0.538-0.125<.001<.00134
OVWASL-DT →-0.585-0.172.001.00434
OVPAXIP1-DT →-0.736-0.162<.001.00334
HNSCRPS3AP37 →-0.552-0.122.005.00834
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration