Induction of bacterial agglutination

pathway activity — cross-omics
GO:0043152Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Induction of bacterial agglutination pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are PLCB2, NCF2, and NNMT, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Induction of bacterial agglutination activity versus PLCB2 in GBM (Pearson r = 0.62).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPLCB2 →+0.721+0.394<.001<.00137
COADNCF2 →+0.631+0.111<.001<.00137
OVNNMT →+0.992+0.129<.001<.00136
GBMTLR2 →+0.500+0.280<.001<.00136
CCRCCFCER1G →+0.708+0.206<.001<.00136
GBMHK3 →+0.705+0.266<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0043152 vs PLCB2 — GBM

Per-sample scatter of Induction of bacterial agglutination activity vs PLCB2 in GBM.

Explore this scatter interactively →

Exploration