"Circadian sleep/wake cycle, non-REM sleep"

pathway activity — cross-omics
GO:0042748Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the "Circadian sleep/wake cycle, non-REM sleep" pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are BTBD9, IL16, and C1R, each associated with the pathway in up to 21 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADBTBD9 →+0.920+0.104<.001<.001321
LUSCIL16 →-0.613-0.041<.001<.001319
UVMC1R →-1.502-0.080.001<.001318
SKCMGAB3 →-0.633-0.049<.001<.001318
SKCMPCED1B-AS1 →-0.902-0.049<.001<.001318
SKCMACAP1 →-0.884-0.048<.001<.001318
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration