Regulation of odontogenesis of dentin-containing tooth

pathway activity — cross-omics
GO:0042487Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of odontogenesis of dentin-containing tooth pathway is significantly associated with the RNA expression of multiple genes, with the ACC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are APCDD1, WIPF1, and BMP4, each associated with the pathway in up to 27 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ACCAPCDD1 →+2.285+0.073<.001<.001327
PRADWIPF1 →+0.943+0.060<.001<.001326
ACCBMP4 →+2.335+0.071<.001<.001227
SCLCNGFR →+2.259+0.888<.001.001227
THYMDSE →+0.953+0.055<.001<.001325
THYMLTBP2 →+1.679+0.078<.001<.001325
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration