Regulation of odontogenesis of dentin-containing tooth

pathway activity — cross-omics
GO:0042487Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of odontogenesis of dentin-containing tooth pathway is significantly associated with the protein abundance of multiple proteins, with the CCRCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CAVIN3, LTBP3, and CAVIN1, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCCAVIN3 →+0.562+0.081<.001<.00139
CCRCCLTBP3 →+0.597+0.071.005.00238
CCRCCCAVIN1 →+0.608+0.089<.001<.00138
GBMF13A1 →+0.787+0.101<.001<.00138
BRCAKANK2 →+0.429+0.045.001<.00138
CCRCCPPM1F →+0.248+0.078<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration