Regulation of odontogenesis of dentin-containing tooth

pathway activity — cross-omics
GO:0042487Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of odontogenesis of dentin-containing tooth pathway is significantly associated with the RNA expression of multiple genes, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are NGFR, MEDAG, and GRIP2, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCNGFR →+1.699+0.886<.001<.00138
OVMEDAG →+1.440+0.670.001.00236
LUADGRIP2 →+0.293+0.405.001<.00135
BRCASRPX →+1.294+0.647<.001.00135
OVSERPINF1 →+1.148+0.723<.001<.00135
OVASGR2 →+0.416+0.711<.001.00435
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration