Vitamin E metabolic process

pathway activity — cross-omics
GO:0042360Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Vitamin E metabolic process pathway is significantly associated with the RNA expression of multiple genes, with the CCRCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MED26, FBL, and RNF32, each associated with the pathway in up to 2 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCMED26 →-0.303-0.138.001.00831
CCRCCFBL →-0.721-0.198.002<.00131
CCRCCRNF32 →-0.588-0.223.004<.00131
CCRCCSRSF9 →-0.618-0.231.002<.00131
CCRCCATP5MC2 →-0.511-0.192<.001.00231
CCRCCRPS2 →-0.875-0.241<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration