Obsolete neurotransmitter metabolic process

pathway activity — cross-omics
GO:0042133Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete neurotransmitter metabolic process pathway is significantly associated with the protein abundance of multiple proteins, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are NUFIP2_T87, SPTBN1_S2128, and MAOA, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADNUFIP2_T87 →-1.079-0.065<.001<.00136
UCECSPTBN1_S2128 →+0.576+0.080<.001<.00136
BRCAMAOA →+0.863+0.037<.001<.00136
BRCANCAPG_S674 →-0.892-0.051<.001<.00136
UCECPTPN2_S304 →-0.930-0.085<.001<.00136
BRCACDYL_S216 →-0.871-0.045<.001.00236
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration