Regulation of cytoplasmic pattern recognition receptor signaling pathway

Across TCGA patient cohorts, RNA activity of the Regulation of cytoplasmic pattern recognition receptor signaling pathway pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are WIPF1, DOCK2, and DOCK8, each associated with the pathway in up to 10 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of cytoplasmic pattern recognition receptor signaling pathway activity versus WIPF1 in BRCA (Pearson r = 0.59).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	WIPF1 →	+0.381	+0.035	<.001	<.001	3	10
GBM	DOCK2 →	+0.614	+0.053	<.001	<.001	3	10
GBM	DOCK8 →	+0.492	+0.054	<.001	<.001	3	10
GBM	FYB1 →	+0.655	+0.048	<.001	<.001	3	10
GBM	HCLS1 →	+0.700	+0.052	<.001	<.001	3	10
BRCA	ANKRD44 →	+0.491	+0.045	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0039531 vs WIPF1 — BRCA

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