Platelet-derived growth factor receptor-alpha signaling pathway

pathway activity — cross-omics
GO:0035790Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Platelet-derived growth factor receptor-alpha signaling pathway pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TUBB6, CLEC11A, and CNN2, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCATUBB6 →+0.317+0.057<.001<.00137
BRCACLEC11A →+0.927+0.081<.001<.00137
BRCACNN2 →+0.494+0.051<.001<.00137
UCECEFEMP2 →+0.662+0.104<.001.00137
LSCCFKBP7 →+0.593+0.073<.001<.00137
LSCCRAI14 →+0.407+0.076<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration