Sequestering of BMP in extracellular matrix

pathway activity — cross-omics
GO:0035582Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Sequestering of BMP in extracellular matrix pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are COL10A1, ISLR, and FBLN2, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACOL10A1 →+2.031+0.192<.001<.00138
LSCCISLR →+1.604+0.200<.001<.00138
OVFBLN2 →+1.513+0.358<.001<.00138
OVROR2 →+0.882+0.438.001.00238
LSCCITGA11 →+1.505+0.181<.001<.00137
OVSFRP2 →+2.665+0.335<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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