Sequestering of extracellular ligand from receptor

pathway activity — cross-omics
GO:0035581Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Sequestering of extracellular ligand from receptor pathway is significantly associated with the RNA expression of multiple genes, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are GREM1, PABPC5, and CALHM5, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADGREM1 →+1.234+0.243<.001<.00138
BRCAPABPC5 →+0.459+0.225.003<.00129
PDACCALHM5 →+0.589+0.208<.001<.00138
COADPLN →+1.136+0.168<.001<.00138
LSCCTGFB3 →+0.544+0.146<.001.00338
BRCADNM3OS →+0.942+0.199<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration