Thioester biosynthetic process

pathway activity — cross-omics
GO:0035384Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Thioester biosynthetic process pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are SMC3, BACH1, and KLK6, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADSMC3 →-0.309-0.155.009.00625
LUADBACH1 →-0.260-0.114<.001.00134
LUADKLK6 →-0.753-0.114<.001.00134
OVRPSAP52 →-0.835-0.199.004.00734
LSCCFA2H →+0.755+0.153<.001.00133
UCECABTB1 →-0.498-0.230<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration