Ectopic germ cell programmed cell death

pathway activity — cross-omics
GO:0035234Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Ectopic germ cell programmed cell death pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are C7, SGO2, and ASPM, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADC7 →-1.290-0.242<.001<.00136
LUADSGO2 →+0.470+0.239.009.00235
LUADASPM →+0.863+0.202<.001.00135
BRCASCUBE2 →-1.988-0.174.002.00535
LUADCDKN3 →+0.837+0.222<.001<.00134
UCECEZH2 →+0.674+0.192<.001.00734
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration