Obsolete regulation of histone acetylation

pathway activity — cross-omics
GO:0035065Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete regulation of histone acetylation pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are DIPK2B, PDLIM3, and COMP, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVDIPK2B →-0.568-0.180.009.00136
BRCAPDLIM3 →-1.308-0.442<.001.00236
LSCCCOMP →-0.986-0.290.002.00736
GBMPICALM →-0.319-0.989.003<.00136
LSCCPRC1-AS1 →+0.597+0.465<.001<.00136
GBMPPFIA2 →-0.656-0.528.009.00836
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration