Centromere complex assembly

pathway activity — cross-omics
GO:0034508Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Centromere complex assembly pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are NCAPG2, FBXO5, and NCAPH, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMNCAPG2 →+0.541+0.716<.001<.00138
GBMFBXO5 →+0.986+1.108<.001<.00137
HNSCNCAPH →+0.846+0.637<.001<.00137
BRCAHJURP →+0.896+0.603<.001<.00137
BRCADIAPH3 →+0.852+0.772<.001<.00137
HNSCFANCI →+0.739+0.508<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration