Type III interferon production

pathway activity — cross-omics
GO:0034343Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Type III interferon production pathway is significantly associated with the RNA expression of multiple genes, with the SCLC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are HERC6, IFIH1, and DDX60, each associated with the pathway in up to 33 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SCLCHERC6 →+2.398+0.677<.001<.001333
TGCTIFIH1 →+1.792+0.203<.001<.001332
TGCTDDX60 →+1.538+0.154<.001<.001332
SARCTLR3 →+1.569+0.144<.001<.001331
SCLCSAMD9L →+1.641+0.760<.001<.001331
MESOIFIT2 →+1.870+0.097<.001<.001330
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration