Macrophage fusion

pathway activity — cross-omics
GO:0034238Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Macrophage fusion pathway is significantly associated with the protein abundance of multiple proteins, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are PNN, TLR2, and UTP15, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPNN →-0.220-0.076<.001<.00138
LSCCTLR2 →+0.447+0.127<.001<.00137
LSCCUTP15 →-0.291-0.076<.001<.00137
GBMWDR43_S77 →-0.400-0.046<.001.00337
LSCCDDX27 →-0.323-0.070<.001<.00137
LSCCSTAB1 →+0.439+0.100<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration