Positive regulation of toll-like receptor 3 signaling pathway

Across TCGA cell cohorts, RNA activity of the Positive regulation of toll-like receptor 3 signaling pathway pathway is significantly associated with the shRNA dependency of multiple genes, with the BLOOD_Myeloma cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TIRAP, PTPN22, and F2RL1, each associated with the pathway in up to 13 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, TIRAP grouped by Positive regulation of toll-like receptor 3 signaling pathway-low versus -high activity in BLOOD_Myeloma.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLOOD_Myeloma	TIRAP →	-0.767	-2.255	<.001	<.001	3	13
CNS	PTPN22 →	-0.545	-0.905	<.001	.001	3	7
BLOOD_Myeloma	F2RL1 →	-0.175	-1.523	.007	<.001	3	5
BLOOD_Myeloma	ASPRV1 →	-0.830	-2.016	.002	.003	3	5
LUNG_NSCLC_LUSC	TUBG2 →	+0.222	+0.267	.008	.001	3	4
SKIN	TRIM3 →	-0.156	-0.906	<.001	.002	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

TIRAP by Positive regulation of toll-like receptor 3 signaling pathway activity — BLOOD_Myeloma

Explore this box plot interactively →