Negative regulation of tissue remodeling

Across TCGA patient cohorts, RNA activity of the Negative regulation of tissue remodeling pathway is significantly associated with the RNA expression of multiple genes, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are FGD2, TLR10, and AIM2, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of tissue remodeling activity versus FGD2 in UCEC (Pearson r = 0.41).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	FGD2 →	+0.751	+0.804	<.001	<.001	3	7
GBM	TLR10 →	+0.563	+0.214	.002	.003	3	7
HNSC	AIM2 →	+1.047	+0.723	.007	<.001	3	7
UCEC	RASAL3 →	+0.711	+0.715	.001	<.001	3	6
UCEC	PIK3CG →	+0.788	+0.690	<.001	<.001	3	6
UCEC	GIMAP2 →	+0.987	+0.591	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0034104 vs FGD2 — UCEC

Explore this scatter interactively →