Leydig cell differentiation

pathway activity — cross-omics
GO:0033327Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Leydig cell differentiation pathway is significantly associated with the protein abundance of multiple proteins, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are PLEKHA1, FHL1, and FNBP4_S18, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADPLEKHA1 →+0.459+0.078<.001.00136
CCRCCFHL1 →+0.842+0.088.005.00235
LSCCFNBP4_S18 →-0.334-0.075.006.00126
GBMCRLF3 →-0.283-0.061.001.00235
BRCACSDC2_S47 →+0.825+0.054<.001<.00135
BRCARBM25 →-0.208-0.076<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration