Inositol trisphosphate biosynthetic process

pathway activity — cross-omics
GO:0032959Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Inositol trisphosphate biosynthetic process pathway is significantly associated with the RNA expression of multiple genes, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are F13A1, RFXANK, and TPD52, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADF13A1 →+0.971+0.474.004.00433
COADRFXANK →-0.214-0.409.001.00233
COADTPD52 →-0.636-0.585<.001.00233
UCECBAX →-0.642-0.718.001.00233
UCECHMGCL →-0.641-0.786<.001<.00133
UCECLINC02206 →+0.392+0.726.005.00233
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration