Negative regulation of CREB transcription factor activity

pathway activity — cross-omics
GO:0032792Cross-omicsSHRNA → SHRNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Negative regulation of CREB transcription factor activity pathway is significantly associated with the shRNA dependency of multiple genes, with the BREAST cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are EIF2AK4, DDIT3, and ADGRG3, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTEIF2AK4 →-0.319-1.202<.001<.00129
LARGE_INTESTINEDDIT3 →-0.285-1.249.001.00228
UPPER_AERODIGESTIVE_TRACTADGRG3 →-0.188-1.319<.001.00836
BLOOD_MyelomaFOXP3 →-0.307-2.058.006<.00127
STOMACHCLEC2D →+0.315+1.452.004.00517
LIVERRLBP1 →-0.360-1.908.005<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration