Positive regulation of phosphoprotein phosphatase activity

pathway activity — cross-omics
GO:0032516Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of phosphoprotein phosphatase activity pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are GLIPR1, LRFN5, and WIPF1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVGLIPR1 →+0.709+0.243.002.00336
UCECLRFN5 →+0.825+0.178.002.00136
OVWIPF1 →+0.750+0.274.004.00435
OVPDE1B →+0.549+0.267.009.00135
OVZEB1 →+0.986+0.299.001.00135
OVCOLEC12 →+0.853+0.286.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration