Positive regulation of nuclease activity

pathway activity — cross-omics
GO:0032075Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of nuclease activity pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are PRKCD, CDH2, and GUSB, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPRKCD →+0.340+0.063<.001<.00135
PDACCDH2 →-0.736-0.060<.001.00134
PDACGUSB →+0.572+0.042.001.00234
GBMTCIRG1 →+0.368+0.042<.001.00134
GBMBIN2_S462 →+0.526+0.064.002.00134
COADTHBS2 →+1.347+0.056<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration