Regulation of deoxyribonuclease activity

pathway activity — cross-omics
GO:0032070Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of deoxyribonuclease activity pathway is significantly associated with the protein abundance of multiple proteins, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are ARHGAP45, IKZF1, and IL16, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCARHGAP45 →+0.384+0.056.003.00338
PDACIKZF1 →+0.525+0.067<.001<.00137
LSCCIL16 →+0.465+0.068.003<.00137
CCRCCLPXN →+0.465+0.049<.001.00237
BRCASEPTIN1 →+0.642+0.047<.001<.00136
LSCCCOTL1 →+0.358+0.054.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration