Obsolete cellular response to extracellular stimulus

pathway activity — cross-omics
GO:0031668Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete cellular response to extracellular stimulus pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TLN1, TNS2_S102, and DCN, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTLN1 →+0.304+0.024.001.00138
LSCCTNS2_S102 →+0.495+0.026.005.00138
OVDCN →+0.839+0.039.004.00138
CCRCCC1orf198 →+0.485+0.023<.001<.00138
BRCARSU1 →+0.305+0.022<.001<.00137
BRCASNX18 →+0.270+0.017.001.00737
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration