Receptor internalization

pathway activity — cross-omics
GO:0031623Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Receptor internalization pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are STARD8, CLEC1A, and SCN7A, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Receptor internalization activity versus STARD8 in OV (Pearson r = 0.43).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVSTARD8 →+0.582+0.166<.001.00136
BRCACLEC1A →+0.466+0.173.004.00436
LUADSCN7A →+1.121+0.100<.001<.00136
HNSCNCF4 →+0.734+0.116.004.00435
LSCCRASSF4 →+0.626+0.144<.001.00235
HNSCBIN2 →+0.851+0.148<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0031623 vs STARD8 — OV

Per-sample scatter of Receptor internalization activity vs STARD8 in OV.

Explore this scatter interactively →

Exploration