Positive regulation of cell killing

pathway activity — tumor vs normal
GO:0031343Tumor vs NormalRNA activityBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RNA activity of the Positive regulation of cell killing pathway differs between tumor and matched normal tissue in 11 of the 18 cancer types tested.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where pathway activity is higher in tumor tissue than in matched normal tissue. In most cancer types, this pathway shows higher activity in tumors, although a few cancer types, such as LUSC and LIHC, show the opposite pattern, with lower activity in tumor tissue.

KIRC, HNSC, and UCEC show the most reproducible tumor–normal differences in pathway activity.

Tumor vs normal pathway activity by lineage

Ranked by sampling consensus. Activity change represents the tumor-versus-normal difference in pathway activity on a log2 scale. Positive values indicate higher pathway activity in tumor tissue. The reported p-values are derived from the corresponding differential activity tests.
LineageGenderStageActivity changepSampling consensus
KIRCFemaleII,III,IV+0.046<.00112view →
HNSCAllAll+0.020<.0018view →
UCECAllAll+0.039<.0016view →
BRCAAllIII,IV+0.035<.0016view →
KIRPMaleAll+0.027<.0016view →
BLCAMaleIII,IV+0.047<.0015view →
THCAFemaleII,III,IV+0.032.0014view →
LUSCMaleIII,IV−0.064.0073view →
LIHCAllAll−0.009.0383view →
STADFemaleAll+0.071.0202view →
CHOLAllII,III,IV−0.069.0472view →
Pink = more active in tumor, green = less active in tumor. Showing the 11 strongest of 11 lineages.

GO:0031343–KIRC

Tumor-vs-normal pathway-activity box plot for Positive regulation of cell killing in KIRC.

Open the KIRC breakdown →

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