Regulation of axon diameter

pathway activity — cross-omics
GO:0031133Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of axon diameter pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are NEFM, CORO6, and CALY, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMNEFM →+0.997+0.661<.001<.00135
LSCCCORO6 →+0.802+0.491.001.00435
GBMCALY →+1.136+0.690<.001.00234
GBMDLG2 →+0.729+0.731<.001<.00134
GBMSPATA5L1 →-0.233-0.604.006.00134
GBMFADS6 →+0.289+0.512.001.00534
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration