Animal organ regeneration

pathway activity — cross-omics
GO:0031100Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Animal organ regeneration pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CEBPB, DDAH1, and FNDC3B, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Animal organ regeneration activity versus CEBPB in BRCA (Pearson r = 0.42).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACEBPB →+0.407+0.034<.001<.00136
LUADDDAH1 →-0.587-0.062<.001<.00136
GBMFNDC3B →+0.468+0.047<.001<.00136
GBMGFPT2 →+0.816+0.046<.001.00136
LUADIGF2BP1_S181 →+1.933+0.043<.001<.00136
GBMIKBIP →+0.762+0.050<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0031100 vs CEBPB — BRCA

Per-sample scatter of Animal organ regeneration activity vs CEBPB in BRCA.

Explore this scatter interactively →

Exploration