Obsolete regulation of histone methylation

pathway activity — cross-omics
GO:0031060Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete regulation of histone methylation pathway is significantly associated with the RNA expression of multiple genes, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CCDC34, HROB, and GINS1, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCCCDC34 →+0.612+1.021.002<.00135
BRCAHROB →+0.514+0.738.002.00134
UCECGINS1 →+0.904+0.723.001.00134
GBMPOLA1 →+0.415+0.626.001.00934
UCECRAD51AP1 →+1.046+0.750.001<.00134
HNSCTMPO →+0.698+0.937<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration