Positive regulation of Wnt signaling pathway

pathway activity — cross-omics
GO:0030177Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of Wnt signaling pathway pathway is significantly associated with the RNA expression of multiple genes, with the URINARY_TRACT cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are VIPR1, MPZL3, and PRSS22, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, VIPR1 grouped by Positive regulation of Wnt signaling pathway-low versus -high activity in URINARY_TRACT.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
URINARY_TRACTVIPR1 →+2.983+0.188<.001<.00135
OVARYMPZL3 →+1.691+0.166<.001<.00135
OVARYPRSS22 →+2.613+0.149.003.00735
LUNG_NSCLC_LUADCDC42BPG →+1.215+0.100<.001<.00135
LUNG_NSCLC_LUADERBB3 →+2.035+0.126.005.00335
PANCREASTPX2 →-1.012-0.192<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

VIPR1 by Positive regulation of Wnt signaling pathway activity — URINARY_TRACT

Box plot of VIPR1 in Positive regulation of Wnt signaling pathway-low vs -high samples in URINARY_TRACT.

Explore this box plot interactively →

Exploration