Telencephalon regionalization

pathway activity — cross-omics
GO:0021978Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Telencephalon regionalization pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are DOCK2, INPP4B, and KANK1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMDOCK2 →-0.630-0.083<.001<.00136
HNSCINPP4B →+0.672+0.160<.001<.00136
HNSCKANK1 →+0.222+0.093.007<.00136
OVADGRG1 →+0.807+0.154<.001<.00135
GBMDOCK8 →-0.476-0.078<.001.00135
GBMEVL →-0.324-0.083.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration