Corticospinal tract morphogenesis

pathway activity — cross-omics
GO:0021957Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Corticospinal tract morphogenesis pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ADAM12, COL1A2, and CALHM5, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAADAM12 →+1.296+0.771<.001.00134
OVCOL1A2 →+1.633+0.868.003.00134
OVCALHM5 →+0.772+0.831.001.00134
OVMSC →+0.887+0.611<.001.00534
OVNTM →+1.024+0.820.002<.00134
BRCAPRPH2 →+0.540+0.783<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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