Cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation

pathway activity — cross-omics
GO:0021937Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation pathway is significantly associated with the RNA expression of multiple genes, with the SCLC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are SMO, CHST10, and CCDC102A, each associated with the pathway in up to 30 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SCLCSMO →+2.323+1.501<.001<.001330
ESCACHST10 →+0.939+0.124<.001<.001218
LAMLCCDC102A →+0.828+0.368<.001.003119
LAMLDIPK1B →+1.337+0.385<.001<.001316
THYMTMEM98 →+1.454+0.140<.001<.001316
ESCACHST14 →+0.873+0.125<.001<.001217
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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