Cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation

pathway activity — cross-omics
GO:0021937Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are LINC01767, LRP3, and FAM166C, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCLINC01767 →-0.656-0.274.005.00133
PDACLRP3 →+0.454+0.159.003.00633
CCRCCFAM166C →+0.778+0.240.003.00133
HNSCTENT5A →-1.022-0.229<.001.00232
HNSCPPP4R4 →-1.900-0.277.003.00832
HNSCHOXA7 →+1.105+0.272.005.00823
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration