Regulation of cerebellar granule cell precursor proliferation

pathway activity — cross-omics
GO:0021936Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of cerebellar granule cell precursor proliferation pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are LZTFL1, NAXD, and PPIB, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVLZTFL1 →+0.329+0.072<.001.00136
GBMNAXD →+0.363+0.127<.001<.00135
LSCCPPIB →-0.409-0.077<.001<.00135
LUADNOP2_S732 →-0.629-0.278.002.00735
HNSCTPPP3 →+0.635+0.472.004.00435
BRCAPPP6R1 →-0.190-0.072<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration