Rhombomere development

pathway activity — cross-omics
GO:0021546Cross-omicsPROTEIN-MS → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Rhombomere development pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are NKAPD1_S288, FLNB_S2492, and RGL2_S737, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCANKAPD1_S288 →+1.458+0.223<.001<.00133
BRCAFLNB_S2492 →-1.021-0.327<.001<.00133
UCECRGL2_S737 →+0.958+0.592.003<.00132
UCECSALL1_S269 →-0.792-0.617<.001<.00132
UCECSBNO1_S754 →-1.042-0.551<.001<.00132
UCECSBNO1_S755 →-1.042-0.551<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration