Somatic motor neuron differentiation

pathway activity — cross-omics
GO:0021523Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Somatic motor neuron differentiation pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are BROX, RO60, and PPP1R18_S368, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCABROX →+0.358+0.042<.001<.00137
BRCARO60 →+0.253+0.045<.001<.00136
GBMPPP1R18_S368 →-0.732-0.074<.001<.00136
BRCAMSI2 →+0.446+0.049.003<.00136
BRCARPRD2_S928 →+0.795+0.052.002.00926
BRCASMARCC2 →+0.176+0.035<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration