Somatic motor neuron differentiation

pathway activity — cross-omics
GO:0021523Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Somatic motor neuron differentiation pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are USP5, TMEM241, and EPHA7, each associated with the pathway in up to 1 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVUSP5 →+1.320+0.412.002.00231
OVTMEM241 →+0.994+0.585.004<.00131
OVEPHA7 →+1.888+0.425.005<.00131
OVCBLN3 →-1.001-0.441<.001<.00131
OVBHMT →+0.520+0.457.001.00931
OVDKK2 →-1.169-0.435.004<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration