CGMP-mediated signaling

pathway activity — cross-omics
GO:0019934Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the CGMP-mediated signaling pathway is significantly associated with the RNA expression of multiple genes, with the CCRCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ADGRA2, PDE1A, and SGIP1, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCADGRA2 →+0.882+0.989<.001<.00138
CCRCCPDE1A →+1.059+0.987<.001<.00137
CCRCCSGIP1 →+1.106+1.080<.001<.00137
GBMRCAN2 →+1.138+0.577<.001<.00137
CCRCCPRKG1 →+0.841+1.068<.001<.00137
UCECPRKG1-AS1 →+0.528+0.653<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration