Axonal transport of mitochondrion

pathway activity — cross-omics
GO:0019896Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Axonal transport of mitochondrion pathway is significantly associated with the RNA expression of multiple genes, with the PANCREAS cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are SPC24, SPATA13, and ABHD13, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, SPC24 grouped by Axonal transport of mitochondrion-low versus -high activity in PANCREAS.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASSPC24 →+0.813+1.026.002<.00135
SOFT_TISSUESPATA13 →-1.701-1.515.006<.00134
LUNG_NSCLC_LUSCABHD13 →-0.412-1.261.008.00134
LUNG_NSCLC_LUSCMDP1 →-0.953-1.563.001<.00134
OVARYSESTD1 →-1.677-1.421.002<.00134
LIVERFAM50B →-1.895-1.503.009.00334
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

SPC24 by Axonal transport of mitochondrion activity — PANCREAS

Box plot of SPC24 in Axonal transport of mitochondrion-low vs -high samples in PANCREAS.

Explore this box plot interactively →

Exploration