Propionate metabolic process

pathway activity — cross-omics
GO:0019541Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Propionate metabolic process pathway is significantly associated with the protein abundance of multiple proteins, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are ACSS1, PCK2, and PCCA, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCACSS1 →+0.959+0.170<.001<.00139
HNSCPCK2 →+0.534+0.115<.001<.00138
BRCAPCCA →+0.380+0.068<.001<.00137
LSCCERRFI1_S251 →-0.854-0.093<.001<.00137
LUADFOSL2_S120 →-0.705-0.105<.001<.00137
LUADPPFIBP2_S387 →+0.444+0.069<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration